Source code for common.pytorch.model_utils.checkpoint_converters.base_converter

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from __future__ import annotations

import json
import logging
import os
import re
from abc import ABC, abstractmethod
from collections import OrderedDict
from typing import Callable, List, Optional, Tuple, Union

import torch
import yaml
from tqdm import tqdm

from modelzoo.common.pytorch import cbtorch


[docs]class EquivalentSubkey: r"""EquivalentSubkey defines the bidirectional relationship between subkeys of a model's checkpoint. This class is simply a 2-tuple with index bounds checking. For example if the normalization layer in one model is named "norm" and "ln" in the other, the relationship can be represented as EquivalentSubkey("norm", "ln"). """
[docs] def __init__(self, a: str, b: str) -> None: self.keys = [a, b]
def __getitem__(self, idx: int) -> str: assert ( idx == 0 or idx == 1 ), "Invalid index into EquivalentSubkey object: {}".format(idx) return self.keys[idx] def __repr__(self) -> str: return "EquivalentSubkey(\"{}\", \"{}\")".format(*self.keys)
[docs]class ConversionRule: r"""ConversionRule defines a "rule" which: 1. a key can be matched against 2. procedure for converting this old key to a new one upon a sucessful match 3. and an action to be taken once the new key is created (ex: updating the state dictionary) A rule consists of a sequence of regex pattern (supplied as a string), EquivalentSubkey object, and (possibly) a BaseDictionaryConverter as long as this object is last in the sequence. It also contains an "exists" argument which can be set to "left", "both", or "right". The "left" and "right" arguments are used to describe if a key exists in one checkpoint format but not the other and should be ignored. Without this behavior, keys that exist in one but not the other wouldn't be matched by any conversion rules, causing a failure as drop_unmatched_keys is disabled by default. Example: The following describes the conversion rule for mapping HF's layer normalization key to CS layer normalization in the GPT2 model. >>> ConversionRule( >>> [ >>> EquivalentSubkey("h", "transformer_decoder.layers"), >>> "\.\d+\.", >>> EquivalentSubkey("ln_1", "norm1"), >>> "\.(weight|bias)", >>> ], >>> action=BaseCheckpointConverter.replaceKey, >>> ) This should be interpreted as: 1. HF uses 'h' to represent the decoder name while CS uses 'transformer_decoder.layers' 2. Both will have keys that follow with a dot, the decoder number, and then another dot 3. HF uses 'ln_1' for the first layer norm while CS names it 'norm1' 4. Both will have keys that follow with a dot and then either weight or bias This representation should make it easy to see how we can 1) build a regex which matches against old keys, and 2) use the matched result & EquivalentSubkey information to create a new key. Finally, once thhe new key is constructed the conversion rule will apply the 'action' described by the user in order to complete the conversion (in this case simply copying the value at old_state's old key into the new_state at the new key). As previously mentioned, a conversion rule object can also contain a checkpoint converter at the end of the sequence. This is used to create a new checkpoint converter which uses another converter to handle a portion of the conversion. Doing so reduces the amount of copy & pasted conversion rules. For example, many models have base model classes which are extended with additional layers for finetuning. For example, HF's GP2Model doesn't contain a language model head while GP2LMHeadModel does. Rather than copying the conversion rules, we could instead define a new checkpoint converter as follows: >>> class Converter_GPT2LMHeadModel_HF_CS17(BaseDictionaryConverter): >>> def __init__(self): >>> super().__init__() >>> self.rules = [ >>> ConversionRule( >>> ["lm_head\.(weight|bias)"], >>> action=BaseCheckpointConverter.replaceKey, >>> ), >>> ConversionRule( >>> [ >>> EquivalentSubkey("transformer.", ""), >>> Converter_GPT2Model_HF_CS17(), >>> ], >>> action=None, >>> ), >>> ] The first rule simply notates that the lm_head key now exists (and is named the same in both models). The second rule notates that if the "transformer." prefix is encountered, we should try all of the GPT2Model HF -> CS 1.7 conversion rules. """
[docs] def __init__( self, segments: List[Union[str, EquivalentSubkey, BaseDictionaryConverter]], exists: str = "both", action: Optional[ Callable[[str, OrderedDict, str, OrderedDict, int], None] ] = None, ) -> None: assert isinstance(segments, list), "Expected segments to be list" for elm in segments: assert ( isinstance(elm, str) or isinstance(elm, EquivalentSubkey) or isinstance(elm, BaseDictionaryConverter) ), f"ConversionRule segment doesn't support type {type(elm)}" assert exists in ["left", "both", "right"] self.segments = segments self.exists = exists self.action = action self.validate_segments()
def __repr__(self) -> str: single_line = len(self.segments) < 2 out = "ConversionRule([" if not single_line: out += "\n" for i in range(len(self.segments)): mod_str = repr(self.segments[i]) if not single_line: mod_str = _addindent(mod_str, 4) + ",\n" out += mod_str action_name = "self." + self.action.__name__ if self.action else "None" out += "], action={})".format(action_name) return out
[docs] @staticmethod def segment_is_converter( elm: Union[str, EquivalentSubkey, BaseDictionaryConverter] ) -> bool: return isinstance(elm, BaseDictionaryConverter)
[docs] def validate_segments(self): for seg in self.segments: if isinstance(seg, str): pattern = re.compile(seg) assert ( pattern.groups == 0 ), "The following regex isn't supported: {}\n\ Compile rule's regex cannot contain capture groups.\n\ Use (?:a|b) instead of (a|b)".format( seg )
[docs] def convert_key( self, old_key: str, old_state_dict: OrderedDict, new_state_dict: OrderedDict, from_index: int, match_start: int = 0, prefix: str = "", action_fn_args: Optional[dict] = None, debug: bool = False, ) -> bool: regex_str = "" maybe_escape = ( lambda elm, idx: re.escape(elm[idx]) if isinstance(elm, EquivalentSubkey) else elm ) regex_str = "" chained_converter = ConversionRule.segment_is_converter( self.segments[-1] ) candidate_segments = len(self.segments) if chained_converter: candidate_segments -= 1 for i in range(candidate_segments): elm = self.segments[i] assert not ConversionRule.segment_is_converter( elm ), "Checkpoint convert objects can only be placed at the end of rules" regex_str += "({})".format(maybe_escape(elm, from_index)) pattern = re.compile(regex_str) match_result = ( pattern.fullmatch(old_key, match_start) if not chained_converter else pattern.match(old_key, match_start) ) if match_result is None: return False converted = prefix to_index = 1 - from_index for i in range(candidate_segments): if isinstance(self.segments[i], EquivalentSubkey): converted += self.segments[i][to_index] else: converted += match_result.group( i + 1 ) # Index 0 always contains full match if chained_converter: converter = self.segments[-1] return converter.convert_key( old_key, old_state_dict, new_state_dict, from_index, match_start=match_result.span()[1], prefix=converted, action_fn_args=action_fn_args, debug=debug, ) else: if debug: print( "Matched {} -> {} action: {}".format( old_key, converted, self.action.__name__ if self.action else "None", ) ) if self.action: self.action( old_key, converted, old_state_dict, new_state_dict, from_index, action_fn_args, ) return True
[docs] def exists_in_index(self, to_index: int) -> bool: return ( self.exists == "both" or (self.exists == "left" and to_index == 0) or (self.exists == "right" and to_index == 1) )
[docs]class FormatVersions(list):
[docs] def __init__(self, *versions) -> None: self.formats = [*versions]
def __contains__(self, key): return key in self.formats def __str__(self) -> str: return ", ".join(self.formats)
[docs]class BaseDictionaryConverter(ABC): r"""A dictionary converter represents a pair of two dictionary formats that can be converted between each other. The converter object defines a list of conversion rules which should be applied when converting one dict format to the other (and vice-versa). In order to make your own dictionary converter, simply: 1. Create a new converter class which inherits from BaseDictionaryConverter 2. Supply a list of conversion rules (self.rules) 3. Override the pre_model_convert or post_model_convert hooks if you need to execute arbitrary behavior before/after the conversion. """
[docs] def __init__(self, pbar_desc=None): self.pbar_desc = pbar_desc
def __repr__(self) -> str: out = "BaseDictionaryConverter([\n" for i in range(len(self.rules)): out += _addindent(repr(self.rules[i]), 4) + ",\n" out += "])" return out
[docs] @staticmethod @abstractmethod def formats() -> Tuple[FormatVersions, FormatVersions]: pass
[docs] @classmethod def supports_conversion(cls, src_fmt, tgt_fmt): return cls.get_from_index(src_fmt, tgt_fmt) is not None
[docs] @classmethod def get_from_index(cls, src_fmt, tgt_fmt): formats = cls.formats() assert ( formats is not None ), "Class {} hasn't provided formats() which is required.".format( cls.__name__ ) if src_fmt in formats[0] and tgt_fmt in formats[1]: return 0 elif src_fmt in formats[1] and tgt_fmt in formats[0]: return 1 else: return None
[docs] @staticmethod def replaceKey( old_key: str, new_key: str, old_state_dict: OrderedDict, new_state_dict: OrderedDict, from_index: int, action_fn_args: Optional[dict] = None, ) -> None: r""" Copies value that exists at old_state_dict's old_key to new_state_dict's new_key. """ new_state_dict[new_key] = old_state_dict[old_key]
[docs] def convert_key( self, old_key: str, old_state_dict: OrderedDict, new_state_dict: OrderedDict, from_index: int, match_start: int = 0, prefix: str = "", action_fn_args: Optional[dict] = None, debug: bool = False, ) -> None: r""" Attempts to convert the old key by matching against the list of conversion rules. The first rule to match is used for conversion (i.e. even if multiple rules *would* match, the latter ones are never used). Returns True if a conversion occured. """ assert hasattr( self, "rules" ), "Converter must have a list of conversion rules" for rule in self.rules: did_convert = rule.convert_key( old_key, old_state_dict, new_state_dict, from_index, match_start, prefix, action_fn_args, debug=debug, ) if did_convert: return True return False
[docs] def convert_all_keys( self, old_state_dict: OrderedDict, new_state_dict: OrderedDict, from_index: int, action_fn_args: Optional[dict] = None, no_progress_bar: bool = True, debug: bool = False, suppress_unmatched_key_warning: bool = False, ): if not no_progress_bar: pbar = tqdm(total=len(old_state_dict.keys()), desc=self.pbar_desc) matched_all_keys = True for key in old_state_dict.keys(): matched_current_key = self.convert_key( key, old_state_dict, new_state_dict, from_index, action_fn_args=action_fn_args, debug=debug, ) if not matched_current_key and not suppress_unmatched_key_warning: logging.warning("Key not matched: {}".format(key)) if not no_progress_bar: pbar.update(1) matched_all_keys = matched_all_keys and matched_current_key return matched_all_keys
[docs]class BaseCheckpointConverter(BaseDictionaryConverter, ABC): r"""Converts between checkpoint state_dict formats."""
[docs] def __init__(self): super().__init__(pbar_desc="Converting Checkpoint")
[docs] @staticmethod @abstractmethod def file_formats() -> Tuple[str, str]: pass
[docs] @staticmethod @abstractmethod def get_config_converter_class() -> BaseConfigConverter: pass
[docs] @classmethod @abstractmethod def load(cls, file: str, from_index: int, **kwargs) -> OrderedDict: pass
[docs] @classmethod @abstractmethod def save( cls, file_without_ext: str, checkpoint: OrderedDict, from_index: int, **kwargs, ) -> str: pass
[docs] @classmethod def convert(cls, checkpoint, configs, checkpoint_from_index, **kwargs): instance = cls() new_checkpoint = instance.convert_helper( checkpoint, configs, checkpoint_from_index, **kwargs ) return new_checkpoint
[docs] def convert_helper( self, checkpoint, configs: Tuple[dict, dict], from_index: int, drop_unmatched_keys: bool = False, no_progress_bar: bool = True, debug: bool = False, ): r""" Converts all keys in a checkpoint from `from_index` format to the other format. Conversion will fail if at least one of the keys did not match on any conversion rules and drop_unmatched_keys is not enabled. Returns the newly converted checkpoint. """ checkpoint = self.pre_checkpoint_convert( checkpoint, configs, from_index ) has_model = "model" in checkpoint old_state_dict = checkpoint["model"] if has_model else checkpoint new_state_dict = OrderedDict() self.pre_model_convert( old_state_dict, new_state_dict, configs, from_index, drop_unmatched_keys, ) matched_all_keys = self.convert_all_keys( old_state_dict, new_state_dict, from_index, action_fn_args={"configs": configs}, no_progress_bar=no_progress_bar, debug=debug, ) self.post_model_convert( old_state_dict, new_state_dict, configs, from_index, drop_unmatched_keys, ) if not matched_all_keys and not drop_unmatched_keys: assert ( matched_all_keys ), "Unable to match all keys. If you want to proceed by dropping keys that couldn't matched, rerun with --drop-unmatched-keys" elif not matched_all_keys: logging.warning( "proceeding even though some keys weren't matched because of --drop-unmatched-keys" ) if has_model: checkpoint["model"] = new_state_dict else: checkpoint = new_state_dict checkpoint = self.post_checkpoint_convert(checkpoint, from_index) del old_state_dict return checkpoint
[docs] def pre_model_convert( self, old_state_dict: OrderedDict, new_state_dict: OrderedDict, configs: Tuple[dict, dict], from_index: int, drop_unmatched_keys: bool, ): r""" Hook executes right before model conversion. """
[docs] def post_model_convert( self, old_state_dict: OrderedDict, new_state_dict: OrderedDict, configs: Tuple[dict, dict], from_index: int, drop_unmatched_keys: bool, ): r""" Hook executes right after model conversion. """
[docs] def pre_checkpoint_convert( self, checkpoint, configs: Tuple[dict, dict], from_index: int, ): r""" Hook executes before checkpoint conversion. """ return checkpoint
[docs] def post_checkpoint_convert( self, checkpoint, from_index: int, ): r""" Hook executes after checkpoint conversion. """ return checkpoint
[docs]class BaseCheckpointConverter_PT_PT(BaseCheckpointConverter):
[docs] def __init__(self): super().__init__()
[docs] @staticmethod def file_formats() -> Tuple[str, str]: return ("mdl", "mdl")
[docs] @classmethod def load(cls, file: str, from_index: int,) -> OrderedDict: if file.endswith(".index.json"): # HF style sharded checkpoint print("Detected HF sharded checkpoint") index_dir = os.path.dirname(file) with open(file, "r") as f: index = json.load(f) files = set(index["weight_map"].values()) combined_checkpoint = {} for bin_file in files: print("Reading", bin_file) combined_checkpoint.update( cbtorch.load(os.path.join(index_dir, bin_file)) ) return combined_checkpoint else: # Any other type of checkpoint return cbtorch.load(file)
[docs] @classmethod def save( cls, file_without_ext: str, checkpoint: OrderedDict, from_index: int, export_h5_checkpoint: bool = False, ) -> OrderedDict: to_index = from_index - 1 output_file_format = cls.file_formats()[to_index] file = file_without_ext + "." + output_file_format if export_h5_checkpoint: cbtorch.save(checkpoint, file) else: torch.save(checkpoint, file) return file
[docs]class BaseCheckpointConverter_HF_CS(BaseCheckpointConverter_PT_PT): r"""HF checkpoints contain model only while CS checkpoints package model, optimizer, and lr_scheduler into a single checkpoint. This class overrides the post_checkpoint_convert to automatically extract/package the state_dict correctly. """
[docs] def __init__(self): super().__init__()
[docs] @staticmethod def file_formats() -> Tuple[str, str]: return ("bin", "mdl")
[docs] def pre_checkpoint_convert( self, checkpoint, configs: Tuple[dict, dict], from_index: int, ): if from_index == 1: # Finalize the CS sparsity early. logging.info( "Finalzing sparsity. The output checkpoint will be dense." ) cs_config = configs[from_index] if cs_config.get("sparsity", {}).get("type") == "sideband": for weight in checkpoint["model"].values(): weight[weight.isnan()] = 0 return checkpoint
[docs] def post_checkpoint_convert( self, checkpoint, from_index: int, ): if from_index == 0: packaged_checkpoint = OrderedDict() packaged_checkpoint["model"] = checkpoint return packaged_checkpoint else: return checkpoint["model"]
[docs]class ConfigConversionError(Exception): "Raised when a config cannot be converted"
[docs]class BaseConfigConverter(BaseDictionaryConverter, ABC):
[docs] def __init__(self): super().__init__(pbar_desc="Converting Config")
[docs] @staticmethod @abstractmethod def file_formats() -> Tuple[str, str]: pass
[docs] @classmethod def load(cls, file: str, from_index: int) -> dict: input_file_format = cls.file_formats()[from_index] if input_file_format == "json": with open(file, "r") as f: return json.load(f) elif input_file_format == "yaml": with open(file, "r") as f: return yaml.load(f, Loader=yaml.SafeLoader) else: raise ValueError( "Unsupported input file format: {}".format( self.input_file_format() ) )
[docs] @classmethod def save(cls, file_without_ext: str, config: dict, from_index: int) -> str: to_index = (from_index + 1) % 2 output_file_format = cls.file_formats()[to_index] file = file_without_ext + "." + output_file_format if output_file_format == "json": with open(file, "w") as f: f.write(json.dumps(config, indent=4)) elif output_file_format == "yaml": with open(file, "w") as f: f.write(yaml.dump(config, indent=4)) else: raise ValueError( "Unsupported input file format: {}".format( self.output_file_format() ) ) return file
[docs] @classmethod def convert( cls, config, from_index: int, drop_unmatched_keys: bool = False, no_progress_bar: bool = True, debug: bool = False, ): instance = cls() return instance.convert_helper( config, from_index, drop_unmatched_keys=drop_unmatched_keys, no_progress_bar=no_progress_bar, debug=debug, )
[docs] def convert_helper( self, config, from_index: int, drop_unmatched_keys: bool = False, no_progress_bar: bool = True, debug: bool = False, ): r""" Converts all keys in a config from `from_index` format to the other format. Conversion will fail if at least one of the keys did not match on any conversion rules and drop_unmatched_keys is not enabled. Returns the newly converted config. """ old_config = self.pre_config_convert(config, from_index) new_config = {} matched_all_keys = self.convert_all_keys( old_config, new_config, from_index, no_progress_bar=no_progress_bar, debug=debug, suppress_unmatched_key_warning=drop_unmatched_keys, ) if not matched_all_keys and not drop_unmatched_keys: assert matched_all_keys, "Unable to match all keys in config." final_config = self.post_config_convert( config, old_config, new_config, from_index, drop_unmatched_keys ) return final_config
[docs] def pre_config_convert( self, config, from_index, ): return config
[docs] def post_config_convert( self, original_config, old_config, new_config, from_index, drop_unmatched_keys, ): return new_config
[docs] @staticmethod def assert_factory_fn(assert_index, assert_value): def assert_factory_wrapper( old_key, new_key, old_state_dict, new_state_dict, from_index, action_fn_args, ): if from_index != assert_index: raise ConfigConversionError( f"{old_key} should not appear in the config" ) if old_state_dict[old_key] != assert_value: raise ConfigConversionError( "Can't convert config with {}={}. Only {} is supported.".format( old_key, old_state_dict[old_key], assert_value ) ) return assert_factory_wrapper
[docs]class BaseConfigConverter_HF_CS(BaseConfigConverter): r"""CS packages model, optimizer, and lr_scheduler into a single config. This class overrides the [pre|post]_config_convert fn to automatically extract/package the model configuration correctly. """
[docs] def __init__(self): super().__init__()
[docs] @staticmethod def file_formats() -> Tuple[str, str]: return ("json", "yaml")
[docs] def pre_config_convert( self, config, from_index, ): if from_index == 1: return config["model"] else: return config
[docs] def post_config_convert( self, original_config, old_config, new_config, from_index, drop_unmatched_keys, ): if from_index == 0: if "mixed_precision" not in new_config: new_config["mixed_precision"] = True return {"model": new_config} else: return new_config
[docs]class BaseConfigConverter_CS_CS(BaseConfigConverter): r"""CS packages model, optimizer, and lr_scheduler into a single config. This class overrides the [pre|post]_config_convert fn to automatically extract/package the model configuration correctly. """
[docs] def __init__(self): super().__init__()
[docs] @staticmethod def file_formats() -> Tuple[str, str]: return ("yaml", "yaml")
[docs] def pre_config_convert( self, config, from_index, ): return config["model"]
[docs] def post_config_convert( self, original_config, old_config, new_config, from_index, drop_unmatched_keys, ): final_config = { key: original_config[key] for key in original_config if key != "model" } final_config["model"] = new_config return final_config
def _addindent(s_, numSpaces): s = s_.split('\n') s = [(numSpaces * ' ') + line for line in s] s = '\n'.join(s) return s